| Accounting | Business | M.B.A. (Accounting Emphasis), Master of Accountancy |
| Anthropology and Languages | Humanities, Education, and Social Sciences | M.A. in Anthropology, M.S. in Anthropology, Graduate Certificate in Forensic Science, Graduate Certificate in Medical Anthropology, M.A. in Spanish, Graduate Certificate in Spanish for Health Professions, Accelerated B.A. to M.A. in Spanish, |
| Athletic Administration | Humanities, Education, and Social Sciences | M.A. in Athletic Administration, M.B.A. (Athletic Administration Emphasis) |
| Athletic Training | Nursing, Rehabilitation, and Human Health | M.S. in Athletic Training |
| Biology | Science and Engineering | Ph.D. in Biology, Ph.D. in Microbiology, D.A. in Biology, M.S. in Biology, M.S. in Microbiology, Accelerated B.S. to M.S. in Biology |
| Business | Business | Master of Business Administration , M.B.A. and Pharm.D. Joint Degree Program |
| Chemistry | Science and Engineering | M.S. in Chemistry, Accelerated B.S. to M.S. in Chemistry |
| Civil Engineering | Science and Engineering | Ph.D. in Engineering Applied Science (CEE Concentration), M.S. in Civil Engineering, M.S. in Environmental Engineering, M.S. in Environmental Science and Management, Accelerated B.S. to M.S. in Civil Engineering |
| Communication | Humanities, Education, and Social Sciences | M.A. in Communication, Accelerated B.A. to M.A. in Communication |
| Communication Sciences and Disorders | Nursing, Rehabilitation, and Human Health | Doctor of Audiology, Master of Speech Language Pathology, Graduate Certificate in Listening and Spoken Language Specialization |
| Community and Public Health | L.S. Skaggs College of Pharmacy and Health Professions | Master of Health Education, Master of Public Health, Graduate Certificate in Public Health, Graduate Certificate in Rural Health, Graduate Certificate in Addiction Studies, Accelerated B.A./B.S. to Master of Health Education, Accelerated B.A./B.S. to Public Health |
| Computer Science | Science and Engineering | M.S. Computer Science, Graduate Certificate in Secure Cyber Operations |
| Counseling | Nursing, Rehabilitation, and Human Health | Ph.D. in Counselor Education and Counseling, Educational Specialist in Counseling, M. Coun. with majors in: --Marriage Couple and Family --Clinical Mental Health --Clinical Rehabilitation Health --School Counseling --or Student Affairs, Graduate Certificate in Animal Assisted Services, Graduate Certificate in Athlete Counseling |
| Deaf Education | Humanities, Education, and Social Sciences | M.S. in Deaf Education |
| Dental Hygiene | L.S. Skaggs College of Pharmacy and Health Professions | M.S. in Dental Hygiene |
| Dental Sciences | College of Health | Idaho Dental Education Program (IDEP), Idaho Advanced General Dentistry Program (IAGD) |
| Economics | Business | M.B.A. (Economics Emphasis) |
| Educational Leadership | Humanities, Education, and Social Sciences | Ed.D. in Educational Leadership, Ed.S. in Education Administration, M.Ed. in P-12 Education Administration, M.Ed. in Educational Leadership, M.Ed. in Educational Administration (Athletic Administration Emphasis), Idaho K-12 Principal Endorsement, Idaho Special Education Director Endorsement |
| Electrical and Computer Engineering | Science and Engineering | M.S. in Electrical and Computer Engineering |
| Elementary Education | Humanities, Education, and Social Sciences | M.Ed. in Elementary Education, M.Ed. in K-12/Music Education, Online Teaching Endorsement, Mathematics Consulting Teacher Endorsement |
| Engineering and Applied Science | Science and Engineering | Ph.D. in Engineering and Applied Science, - CEE Concentration, - ECE Concentration, - Math Concentration, - MMCE Concentration, - Computer Science Concentration |
| English | Humanities, Education, and Social Sciences | Ph.D. in English and the Teaching of English, M.A. in English, Accelerated B.A. to M.A. in English, Graduate Certificate in TESOL, Graduate Certificate in Public Humanities, Graduate Certificate in Biomedical Ethics |
| Finance | Business | M.B.A. (Finance Emphasis) |
| Geosciences | Science and Engineering | Ph.D. in Geosciences, M.S. in Geographic Information Science, M.S. in Geology, - Geology Research Concentration, - Geology Management Concentration, - Environmental Geoscience Emphasis, Accelerated B.S. to MGIS (Geospatial Systems Track), Accelerated B.S. to MGIS (Environmental Systems Track), Accelerated B.A. in Geology to MGIS, Accelerated B.S. in Geology to MGIS, Graduate Certificate in Geographic Information Science |
| Health Science | L.S. Skaggs College of Pharmacy and Health Professions | Graduate Certificate in Interprofessional Geriatrics, Graduate Certificate in Mindfulness |
| Healthcare Administration | Business | Master of Healthcare Administration, Graduate Certificate in Healthcare Administration for DNPs |
| History | Humanities, Education, and Social Sciences | M.A. in History, Graduate Certificate in Environmental Studies, |
| Homeland Security | L.S. Skaggs College of Pharmacy and Health Professions | M.S. in Homeland Security and Emergency Management, Accelerated B.S. to M.S. in Homeland Security and Emergency Management, Graduate Certificate in Homeland Security and Emergency Management, |
| Human Resource Development (While these programs are not accredited by AACSB, they are under the umbrella university regional accreditation of all programs with NWCCU) | Business | M.S. in Human Resource Development, Graduate Certificate in Organizational Leadership, Graduate Certificate in Career and Technical Education, Graduate Certificate in Human Resource Development, Graduate Certificate in Instructional Design, Graduate Certificate in Multimedia Design and Development |
| Informatics | Business | M.B.A. (Cybersecurity Emphasis) |
| Instructional Design and Technology | Humanities, Education, and Social Sciences | Ph.D. in Instructional Design, M.Ed. in Instructional Design and Technology |
| Interdisciplinary Studies - Education | Education | M.Ed. in Interdisciplinary Studies |
| Interdisciplinary Studies - Master of Arts | Arts and Letters | M.A. in Interdisciplinary Studies |
| Interdisciplinary Studies - Master of Science | Science and Engineering | M.S.in Interdisciplinary Studies |
| Literacy | Humanities, Education, and Social Sciences | M.Ed. in Literacy |
| Marketing | Business | M.B.A. (Marketing Emphasis) |
| Mathematics and Statistics | Science and Engineering | D.A. in Mathematics, M.S. in Mathematics, Graduate Certificate in Applied Statistics |
| Measurement and Control Engineering | Science and Engineering | M.S. in Measurement and Control Engineering |
| Mechanical Engineering | Science and Engineering | M.S.in Mechanical Engineering, Accelerated B.S. to M.S. in Mechanical Engineering |
| Medical Laboratory Science | L.S. Skaggs College of Pharmacy and Health Professions | M.S. in Medical Laboratory Science |
| Nuclear Engineering | Science and Engineering | Ph.D. in Nuclear Science and Engineering, M.S. in Nuclear Science and Engineering, M.S. in Health Physics, Graduate Certificate in Nuclear Safeguard and Security |
| Nursing | School of Nursing | Ph.D. in Nursing, Doctor of Nursing Practice. with options in: --Family Nurse Practitioner --or Psychiatric Mental Health Nurse Practitioner, Doctor of Nurse Anesthesia Practice, M.S. in Nursing Education, FNP to PMHNP Certificate, Graduate Certificate in Nursing Education |
| Nutrition and Dietetics | L.S. Skaggs College of Pharmacy and Health Professions | M.S. in Nutrition, M.S. in Nutrition with Dietetic Internship |
| Occupational Therapy | Nursing, Rehabilitation, and Human Health | Master of Occupational Therapy |
| Pharmacy | L.S. Skaggs College of Pharmacy and Health Professions | Ph.D. in Pharmaceutical Sciences with emphases in: --Pharmaceutics --Drug Discovery --Pharmacology --Pharmacoeconomics and Administrative Sciences, M.S. in Pharmaceutical Sciences with emphases in: --Pharmaceutics --Drug Discovery --Pharmacology --Pharmacoeconomics and Administrative Sciences, Dual Pharm.D./Graduate Degree Programs, Pharm.D. and MBA Joint Degree Program |
| Philosophy | Humanities, Education, and Social Sciences | Graduate Certificate in Biomedical Ethics |
| Physical Therapy | Nursing, Rehabilitation, and Human Health | Doctor of Physical Therapy |
| Physician Assistant | L.S. Skaggs College of Pharmacy and Health Professions | Master of Physician Assistant Studies, Graduate Certificate in Lifestyle Medicine |
| Physics | Science and Engineering | Ph.D. in Applied Physics, M.S. in Physics |
| Political Science | Humanities, Education, and Social Sciences | D.A. in Political Science, M.A. in Political Science, Master of Public Administration, M.B.A. (Public Administration Emphasis), Accelerated B.A./B.S. in Political Science to MPA, Accelerated B.A. to M.A. in Political Science |
| Psychology | Humanities, Education, and Social Sciences | Psy.D. in Clinical Psychology, Ph.D. in Clinical Psychology, Ph.D. in Experimental Psychology, M.S. in Psychology |
| Rehabilitation and Health Sciences | Nursing, Rehabilitation, and Human Health | Ph.D. in Rehabilitation and Health Sciences |
| School Psychology | Humanities, Education, and Social Sciences | Ed.S. in School Psychology, M.Ed. in School Psychological Examiner |
| Secondary Education | Humanities, Education, and Social Sciences | M.A. in Teaching, M.Ed. in Secondary Education, Online Teaching Endorsement |
| Social Work | Humanities, Education, and Social Sciences | Master of Social Work |
| Special Education | Humanities, Education, and Social Sciences | M.Ed. Special Education |